DOI: 10.18129/B9.bioc.ivygapSE  

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see ivygapSE.

A SummarizedExperiment for Ivy-GAP data

Bioconductor version: 3.16

Define a SummarizedExperiment and exploratory app for Ivy-GAP glioblastoma image, expression, and clinical data.

Author: Vince Carey

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("ivygapSE")):


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HTML R Script ivygapSE -- SummarizedExperiment for Ivy-GAP
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biocViews GeneExpression, Sequencing, Software, Survival, Transcription, Visualization
Version 1.20.0
In Bioconductor since BioC 3.6 (R-3.4) (5.5 years)
License Artistic-2.0
Depends R (>= 3.5.0), SummarizedExperiment
Imports shiny, survival, survminer, hwriter, plotly, ggplot2, S4Vectors, graphics, stats, utils, UpSetR
Suggests knitr, png, limma, grid, DT, randomForest, digest, testthat, rmarkdown
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Source Package ivygapSE_1.20.0.tar.gz
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