DOI: 10.18129/B9.bioc.ipdDb  

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see ipdDb.

IPD IMGT/HLA and IPD KIR database for Homo sapiens

Bioconductor version: 3.16

All alleles from the IPD IMGT/HLA and IPD KIR database for Homo sapiens. Reference: Robinson J, Maccari G, Marsh SGE, Walter L, Blokhuis J, Bimber B, Parham P, De Groot NG, Bontrop RE, Guethlein LA, and Hammond JA KIR Nomenclature in non-human species Immunogenetics (2018), in preparation.

Author: Steffen Klasberg

Maintainer: Steffen Klasberg <klasberg at dkms-lab.de>

Citation (from within R, enter citation("ipdDb")):


To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:



HTML R Script ipdDb
PDF   Reference Manual
Text   NEWS


biocViews AnnotationHubSoftware, DataRepresentation, GenomicVariation, SequenceMatching, Software, VariantAnnotation
Version 1.16.0
In Bioconductor since BioC 3.8 (R-3.5) (4.5 years)
License Artistic-2.0
Depends R (>= 3.5.0), methods, AnnotationDbi(>= 1.43.1), AnnotationHub
Imports Biostrings, GenomicRanges, RSQLite, DBI, IRanges, stats, assertthat
Suggests knitr, rmarkdown, testthat
URL https://github.com/DKMS-LSL/ipdDb
BugReports https://github.com/DKMS-LSL/ipdDb/issues/new
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package ipdDb_1.16.0.tar.gz
Windows Binary ipdDb_1.16.0.zip (64-bit only)
macOS Binary (x86_64) ipdDb_1.16.0.tgz
macOS Binary (arm64) ipdDb_1.16.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/ipdDb
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/ipdDb
Bioc Package Browser https://code.bioconductor.org/browse/ipdDb/
Package Short Url https://bioconductor.org/packages/ipdDb/
Package Downloads Report Download Stats

Documentation »


R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: