DOI: 10.18129/B9.bioc.heatmaps  

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see heatmaps.

Flexible Heatmaps for Functional Genomics and Sequence Features

Bioconductor version: 3.16

This package provides functions for plotting heatmaps of genome-wide data across genomic intervals, such as ChIP-seq signals at peaks or across promoters. Many functions are also provided for investigating sequence features.

Author: Malcolm Perry <mgperry32 at gmail.com>

Maintainer: Malcolm Perry <mgperry32 at gmail.com>

Citation (from within R, enter citation("heatmaps")):


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biocViews FunctionalGenomics, SequenceMatching, Software, Visualization
Version 1.22.0
In Bioconductor since BioC 3.5 (R-3.4) (6 years)
License Artistic-2.0
Depends R (>= 3.5.0)
Imports methods, grDevices, graphics, stats, Biostrings, GenomicRanges, IRanges, KernSmooth, plotrix, Matrix, EBImage, RColorBrewer, BiocGenerics, GenomeInfoDb
Suggests BSgenome.Drerio.UCSC.danRer7, knitr, rmarkdown, testthat
Depends On Me
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Follow Installation instructions to use this package in your R session.

Source Package heatmaps_1.22.0.tar.gz
Windows Binary heatmaps_1.22.0.zip (64-bit only)
macOS Binary (x86_64) heatmaps_1.22.0.tgz
macOS Binary (arm64) heatmaps_1.22.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/heatmaps
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/heatmaps
Bioc Package Browser https://code.bioconductor.org/browse/heatmaps/
Package Short Url https://bioconductor.org/packages/heatmaps/
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