DOI: 10.18129/B9.bioc.flowClust  

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see flowClust.

Clustering for Flow Cytometry

Bioconductor version: 3.16

Robust model-based clustering using a t-mixture model with Box-Cox transformation. Note: users should have GSL installed. Windows users: 'consult the README file available in the inst directory of the source distribution for necessary configuration instructions'.

Author: Raphael Gottardo, Kenneth Lo <c.lo at stat.ubc.ca>, Greg Finak <greg at ozette.ai>

Maintainer: Greg Finak <greg at ozette.ai>, Mike Jiang <mike at ozette.ai>

Citation (from within R, enter citation("flowClust")):


To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


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HTML R Script Robust Model-based Clustering of Flow Cytometry Data\\ The flowClust package
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Text   NEWS


biocViews Clustering, FlowCytometry, ImmunoOncology, Software, Visualization
Version 3.36.1
In Bioconductor since BioC 2.2 (R-2.7) (15 years)
License MIT
Depends R (>= 2.5.0)
Imports BiocGenerics, methods, Biobase, graph, flowCore, parallel
Suggests testthat, flowWorkspace, flowWorkspaceData, knitr, rmarkdown, openCyto, flowStats(>= 4.7.1)
SystemRequirements GNU make
Depends On Me flowMerge, flowTrans
Imports Me CONFESS, cyanoFilter, flowTrans, openCyto
Suggests Me BiocGenerics, flowTime
Links To Me
Build Report  

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Follow Installation instructions to use this package in your R session.

Source Package flowClust_3.36.1.tar.gz
Windows Binary flowClust_3.36.1.zip
macOS Binary (x86_64) flowClust_3.36.1.tgz
macOS Binary (arm64) flowClust_3.36.1.tgz
Source Repository git clone https://git.bioconductor.org/packages/flowClust
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/flowClust
Bioc Package Browser https://code.bioconductor.org/browse/flowClust/
Package Short Url https://bioconductor.org/packages/flowClust/
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