DOI: 10.18129/B9.bioc.diffcoexp  

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see diffcoexp.

Differential Co-expression Analysis

Bioconductor version: 3.16

A tool for the identification of differentially coexpressed links (DCLs) and differentially coexpressed genes (DCGs). DCLs are gene pairs with significantly different correlation coefficients under two conditions. DCGs are genes with significantly more DCLs than by chance.

Author: Wenbin Wei, Sandeep Amberkar, Winston Hide

Maintainer: Wenbin Wei <wenbin.wei2 at durham.ac.uk>

Citation (from within R, enter citation("diffcoexp")):


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PDF R Script About diffcoexp
PDF   Reference Manual
Text   NEWS


biocViews Coverage, DifferentialExpression, GeneExpression, ImmunoOncology, Microarray, OneChannel, RNASeq, Sequencing, Software, Transcription, TwoChannel
Version 1.18.0
In Bioconductor since BioC 3.7 (R-3.5) (5 years)
License GPL (>2)
Depends R (>= 3.5), WGCNA, SummarizedExperiment
Imports stats, DiffCorr, psych, igraph, BiocGenerics
Suggests GEOquery
URL https://github.com/hidelab/diffcoexp
Depends On Me
Imports Me ExpHunterSuite
Suggests Me
Links To Me
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Source Package diffcoexp_1.18.0.tar.gz
Windows Binary diffcoexp_1.18.0.zip
macOS Binary (x86_64) diffcoexp_1.18.0.tgz
macOS Binary (arm64) diffcoexp_1.18.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/diffcoexp
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/diffcoexp
Bioc Package Browser https://code.bioconductor.org/browse/diffcoexp/
Package Short Url https://bioconductor.org/packages/diffcoexp/
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