DOI: 10.18129/B9.bioc.bayNorm  

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see bayNorm.

Single-cell RNA sequencing data normalization

Bioconductor version: 3.16

bayNorm is used for normalizing single-cell RNA-seq data.

Author: Wenhao Tang [aut, cre], Fran<U+00E7>ois Bertaux [aut], Philipp Thomas [aut], Claire Stefanelli [aut], Malika Saint [aut], Samuel Marguerat [aut], Vahid Shahrezaei [aut]

Maintainer: Wenhao Tang <wt215 at>

Citation (from within R, enter citation("bayNorm")):


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biocViews ImmunoOncology, Normalization, RNASeq, Sequencing, SingleCell, Software
Version 1.16.2
In Bioconductor since BioC 3.8 (R-3.5) (4.5 years)
License GPL (>= 2)
Depends R (>= 3.5)
Imports Rcpp (>= 0.12.12), BB, foreach, iterators, doSNOW, Matrix, parallel, MASS, locfit, fitdistrplus, stats, methods, graphics, grDevices, SingleCellExperiment, SummarizedExperiment, BiocParallel, utils
LinkingTo Rcpp, RcppArmadillo, RcppProgress
Suggests knitr, rmarkdown, BiocStyle, devtools, testthat
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