DOI: 10.18129/B9.bioc.annaffy  

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see annaffy.

Annotation tools for Affymetrix biological metadata

Bioconductor version: 3.16

Functions for handling data from Bioconductor Affymetrix annotation data packages. Produces compact HTML and text reports including experimental data and URL links to many online databases. Allows searching biological metadata using various criteria.

Author: Colin A. Smith <colin at>

Maintainer: Colin A. Smith <colin at>

Citation (from within R, enter citation("annaffy")):


To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:



PDF R Script annaffy Primer
PDF   Reference Manual


biocViews Annotation, GO, Microarray, OneChannel, Pathways, ReportWriting, Software
Version 1.70.0
In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 18 years)
License LGPL
Depends R (>= 2.5.0), methods, Biobase, BiocManager, GO.db
Imports AnnotationDbi(>= 0.1.15), DBI
Suggests hgu95av2.db, multtest, tcltk
Depends On Me webbioc
Imports Me a4Base
Suggests Me metaMA
Links To Me
Build Report  

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Source Package annaffy_1.70.0.tar.gz
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macOS Binary (x86_64) annaffy_1.70.0.tgz
macOS Binary (arm64) annaffy_1.70.0.tgz
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