DOI: 10.18129/B9.bioc.TurboNorm  

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see TurboNorm.

A fast scatterplot smoother suitable for microarray normalization

Bioconductor version: 3.16

A fast scatterplot smoother based on B-splines with second-order difference penalty. Functions for microarray normalization of single-colour data i.e. Affymetrix/Illumina and two-colour data supplied as marray MarrayRaw-objects or limma RGList-objects are available.

Author: Maarten van Iterson and Chantal van Leeuwen

Maintainer: Maarten van Iterson <mviterson at gmail.com>

Citation (from within R, enter citation("TurboNorm")):


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PDF R Script TurboNorm Overview
PDF   Reference Manual
Text   NEWS


biocViews CpGIsland, DNAMethylation, MethylationArray, Microarray, Normalization, OneChannel, Preprocessing, Software, TwoChannel
Version 1.46.0
In Bioconductor since BioC 2.8 (R-2.13) (12 years)
License LGPL
Depends R (>= 2.12.0), convert, limma(>= 1.7.0), marray
Imports stats, grDevices, affy, lattice
Suggests BiocStyle, affydata
URL http://www.humgen.nl/MicroarrayAnalysisGroup.html
Depends On Me
Imports Me
Suggests Me
Links To Me
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Source Package TurboNorm_1.46.0.tar.gz
Windows Binary TurboNorm_1.46.0.zip
macOS Binary (x86_64) TurboNorm_1.46.0.tgz
macOS Binary (arm64) TurboNorm_1.46.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/TurboNorm
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/TurboNorm
Bioc Package Browser https://code.bioconductor.org/browse/TurboNorm/
Package Short Url https://bioconductor.org/packages/TurboNorm/
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