DOI: 10.18129/B9.bioc.TreeAndLeaf  

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see TreeAndLeaf.

Displaying binary trees with focus on dendrogram leaves

Bioconductor version: 3.16

The TreeAndLeaf package combines unrooted and force-directed graph algorithms in order to layout binary trees, aiming to represent multiple layers of information onto dendrogram leaves.

Author: Leonardo W. Kume, Luis E. A. Rizzardi, Milena A. Cardoso, Mauro A. A. Castro

Maintainer: Milena A. Cardoso <milenandreuzo at>

Citation (from within R, enter citation("TreeAndLeaf")):


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HTML R Script TreeAndLeaf: an graph layout to dendrograms.
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biocViews DataRepresentation, GraphAndNetwork, Infrastructure, Network, Software, Visualization
Version 1.10.0
In Bioconductor since BioC 3.11 (R-4.0) (3 years)
License Artistic-2.0
Depends R (>= 4.0)
Imports RedeR(>= 1.40.4), igraph, ape
Suggests knitr, rmarkdown, BiocStyle, RUnit, BiocGenerics, stringr, geneplast, ggtree, ggplot2, dplyr, dendextend, RColorBrewer
Depends On Me
Imports Me
Suggests Me RedeR
Links To Me
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