DOI: 10.18129/B9.bioc.Organism.dplyr  

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see Organism.dplyr.

dplyr-based Access to Bioconductor Annotation Resources

Bioconductor version: 3.16

This package provides an alternative interface to Bioconductor 'annotation' resources, in particular the gene identifier mapping functionality of the 'org' packages (e.g., and the genome coordinate functionality of the 'TxDb' packages (e.g., TxDb.Hsapiens.UCSC.hg38.knownGene).

Author: Martin Morgan [aut, cre], Daniel van Twisk [ctb], Yubo Cheng [aut]

Maintainer: Martin Morgan <martin.morgan at>

Citation (from within R, enter citation("Organism.dplyr")):


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biocViews Annotation, GenomeAnnotation, Sequencing, Software
Version 1.26.0
In Bioconductor since BioC 3.5 (R-3.4) (6 years)
License Artistic-2.0
Depends R (>= 3.4), dplyr (>= 0.7.0), AnnotationFilter(>= 1.1.3)
Imports RSQLite, S4Vectors, GenomeInfoDb, IRanges, GenomicRanges, GenomicFeatures, AnnotationDbi, rlang, methods, tools, utils, BiocFileCache, DBI, dbplyr, tibble
Suggests, TxDb.Hsapiens.UCSC.hg38.knownGene,, TxDb.Mmusculus.UCSC.mm10.ensGene, testthat, knitr, rmarkdown, BiocStyle, ggplot2
Depends On Me annotation
Imports Me Ularcirc
Suggests Me
Links To Me
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