DOI: 10.18129/B9.bioc.MouseFM  

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see MouseFM.

In-silico methods for genetic finemapping in inbred mice

Bioconductor version: 3.16

This package provides methods for genetic finemapping in inbred mice by taking advantage of their very high homozygosity rate (>95%).

Author: Matthias Munz [aut, cre] , Inken Wohlers [aut] , Hauke Busch [aut]

Maintainer: Matthias Munz <matthias.munz at>

Citation (from within R, enter citation("MouseFM")):


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biocViews BiomedicalInformatics, FunctionalGenomics, GenePrediction, GeneTarget, Genetics, GenomicVariation, MathematicalBiology, MultipleComparison, PatternLogic, SNP, Software, SystemsBiology, VariantAnnotation
Version 1.8.0
In Bioconductor since BioC 3.12 (R-4.0) (2.5 years)
License GPL-3
Depends R (>= 4.0.0)
Imports httr, curl, GenomicRanges, dplyr, ggplot2, reshape2, scales, gtools, tidyr, data.table, jsonlite, rlist, GenomeInfoDb, methods, biomaRt, stats, IRanges
Suggests BiocStyle, testthat, knitr, rmarkdown
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