DOI: 10.18129/B9.bioc.IWTomics  

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see IWTomics.

Interval-Wise Testing for Omics Data

Bioconductor version: 3.16

Implementation of the Interval-Wise Testing (IWT) for omics data. This inferential procedure tests for differences in "Omics" data between two groups of genomic regions (or between a group of genomic regions and a reference center of symmetry), and does not require fixing location and scale at the outset.

Author: Marzia A Cremona, Alessia Pini, Francesca Chiaromonte, Simone Vantini

Maintainer: Marzia A Cremona <mac78 at psu.edu>

Citation (from within R, enter citation("IWTomics")):


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PDF R Script Introduction to IWTomics
PDF   Reference Manual
Text   NEWS


biocViews DataImport, DifferentialExpression, DifferentialMethylation, DifferentialPeakCalling, GenomeAnnotation, MultipleComparison, Software, StatisticalMethod
Version 1.22.0
In Bioconductor since BioC 3.5 (R-3.4) (6 years)
License GPL (>=2)
Depends R (>= 3.5.0), GenomicRanges
Imports parallel, gtable, grid, graphics, methods, IRanges, KernSmooth, fda, S4Vectors, grDevices, stats, utils, tools
Suggests knitr
Depends On Me
Imports Me
Suggests Me
Links To Me
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Source Package IWTomics_1.22.0.tar.gz
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