DOI: 10.18129/B9.bioc.GEM  

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see GEM.

GEM: fast association study for the interplay of Gene, Environment and Methylation

Bioconductor version: 3.16

Tools for analyzing EWAS, methQTL and GxE genome widely.

Author: Hong Pan, Joanna D Holbrook, Neerja Karnani, Chee-Keong Kwoh

Maintainer: Hong Pan <pan_hong at>

Citation (from within R, enter citation("GEM")):


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biocViews DNAMethylation, GUI, GeneExpression, GenomeWideAssociation, MethylSeq, MethylationArray, Regression, SNP, Software
Version 1.24.0
In Bioconductor since BioC 3.4 (R-3.3) (6.5 years)
License Artistic-2.0
Depends R (>= 3.3)
Imports tcltk, ggplot2, methods, stats, grDevices, graphics, utils
Suggests knitr, RUnit, testthat, BiocGenerics, rmarkdown, markdown
Depends On Me
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