DOI: 10.18129/B9.bioc.DExMA  

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see DExMA.

Differential Expression Meta-Analysis

Bioconductor version: 3.16

performing all the steps of gene expression meta-analysis considering the possible existence of missing genes. It provides the necessary functions to be able to perform the different methods of gene expression meta-analysis. In addition, it contains functions to apply quality controls, download GEO datasets and show graphical representations of the results.

Author: Juan Antonio Villatoro-García [aut, cre], Pedro Carmona-Sáez [aut]

Maintainer: Juan Antonio Villatoro-García <juanantoniovillatorogarcia at>

Citation (from within R, enter citation("DExMA")):


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PDF R Script Differential Expression Meta-Analysis with DExMA package
PDF   Reference Manual
Text   NEWS


biocViews DifferentialExpression, GeneExpression, QualityControl, Software, StatisticalMethod
Version 1.6.0
In Bioconductor since BioC 3.13 (R-4.1) (2 years)
License GPL-2
Depends R (>= 4.1), DExMAdata
Imports Biobase, GEOquery, impute, limma, pheatmap, plyr, scales, snpStats, sva, swamp, stats, methods, utils, bnstruct, RColorBrewer, grDevices
Suggests BiocStyle, qpdf, BiocGenerics, RUnit
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