DOI: 10.18129/B9.bioc.CNORfeeder  

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see CNORfeeder.

Integration of CellNOptR to add missing links

Bioconductor version: 3.16

This package integrates literature-constrained and data-driven methods to infer signalling networks from perturbation experiments. It permits to extends a given network with links derived from the data via various inference methods and uses information on physical interactions of proteins to guide and validate the integration of links.

Author: Federica Eduati [aut], Enio Gjerga [ctb], Attila Gabor [cre]

Maintainer: Attila Gabor <attila.gabor at>

Citation (from within R, enter citation("CNORfeeder")):


To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:



PDF R Script Main vignette:Playing with networks using CNORfeeder
PDF   Reference Manual
Text   NEWS


biocViews CellBasedAssays, CellBiology, NetworkInference, Proteomics, Software
Version 1.38.0
In Bioconductor since BioC 2.12 (R-3.0) (10 years)
License GPL-3
Depends R (>= 3.6.0), CellNOptR(>= 1.4.0), graph
Suggests minet, catnet, Rgraphviz, RUnit, BiocGenerics, igraph
Enhances MEIGOR
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package CNORfeeder_1.38.0.tar.gz
Windows Binary
macOS Binary (x86_64) CNORfeeder_1.38.0.tgz
macOS Binary (arm64) CNORfeeder_1.38.0.tgz
Source Repository git clone
Source Repository (Developer Access) git clone
Bioc Package Browser
Package Short Url
Package Downloads Report Download Stats

Documentation »


R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: