|
|
|
|
|
|
Bioconductor version: Release (3.15)
Image feature data and analysis codes for the Guglielmi, Barry et al. paper describing the application of an optogenetics tools to disrupt Drosophila embryo furrowing.
Author: Joseph Barry
Maintainer: Joseph Barry <joseph.barry at embl.de>
Citation (from within R,
enter citation("furrowSeg")
):
To install this package, start R (version "4.2") and enter:
if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("furrowSeg")
For older versions of R, please refer to the appropriate Bioconductor release.
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("furrowSeg")
R Script | Supplementary Methods - Automatic generation of paper figures | |
R Script | Supplementary Methods - Example furrow segmentation | |
Reference Manual |
biocViews | Drosophila_melanogaster_Data, ExperimentData, ReproducibleResearch, Tissue |
Version | 1.24.0 |
License | Artistic-2.0 |
Depends | R (>= 3.3), EBImage |
Imports | abind, dplyr, locfit, tiff |
LinkingTo | |
Suggests | BiocStyle, ggplot2, knitr |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | furrowSeg_1.24.0.tar.gz |
Windows Binary | |
macOS Binary (x86_64) | |
Source Repository | git clone https://git.bioconductor.org/packages/furrowSeg |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/furrowSeg |
Package Short Url | https://bioconductor.org/packages/furrowSeg/ |
Package Downloads Report | Download Stats |
Documentation »
Bioconductor
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations: