iterativeBMA

DOI: 10.18129/B9.bioc.iterativeBMA    

The Iterative Bayesian Model Averaging (BMA) algorithm

Bioconductor version: Release (3.15)

The iterative Bayesian Model Averaging (BMA) algorithm is a variable selection and classification algorithm with an application of classifying 2-class microarray samples, as described in Yeung, Bumgarner and Raftery (Bioinformatics 2005, 21: 2394-2402).

Author: Ka Yee Yeung, University of Washington, Seattle, WA, with contributions from Adrian Raftery and Ian Painter

Maintainer: Ka Yee Yeung <kayee at u.washington.edu>

Citation (from within R, enter citation("iterativeBMA")):

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("iterativeBMA")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("iterativeBMA")

 

PDF R Script The Iterative Bayesian Model Averaging Algorithm
PDF   Reference Manual

Details

biocViews Classification, Microarray, Software
Version 1.54.0
In Bioconductor since BioC 2.3 (R-2.8) (14 years)
License GPL (>= 2)
Depends BMA, leaps, Biobase(>= 2.5.5)
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL http://faculty.washington.edu/kayee/research.html
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package iterativeBMA_1.54.0.tar.gz
Windows Binary iterativeBMA_1.54.0.zip
macOS Binary (x86_64) iterativeBMA_1.54.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/iterativeBMA
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/iterativeBMA
Package Short Url https://bioconductor.org/packages/iterativeBMA/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: