DAPARdata

DOI: 10.18129/B9.bioc.DAPARdata    

Data accompanying the DAPAR and Prostar packages

Bioconductor version: Release (3.14)

Mass-spectrometry based UPS proteomics data sets from Ramus C, Hovasse A, Marcellin M, Hesse AM, Mouton-Barbosa E, Bouyssie D, Vaca S, Carapito C, Chaoui K, Bruley C, Garin J, Cianferani S, Ferro M, Dorssaeler AV, Burlet-Schiltz O, Schaeffer C, Coute Y, Gonzalez de Peredo A. Spiked proteomic standard dataset for testing label-free quantitative software and statistical methods. Data Brief. 2015 Dec 17;6:286-94 and Giai Gianetto, Q., Combes, F., Ramus, C., Bruley, C., Coute, Y., Burger, T. (2016). Calibration plot for proteomics: A graphical tool to visually check the assumptions underlying FDR control in quantitative experiments. Proteomics, 16(1), 29-32.

Author: Samuel Wieczorek and Florence Combes

Maintainer: Samuel Wieczorek <samuel.wieczorek at cea.fr>

Citation (from within R, enter citation("DAPARdata")):

Installation

To install this package, start R (version "4.1") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("DAPARdata")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF   Reference Manual
Text   NEWS

Details

biocViews ExperimentData, MassSpectrometryData
Version 1.24.0
License GPL-2
Depends R (>= 4.1.0)
Imports utils, knitr, MSnbase
LinkingTo
Suggests DAPAR(>= 1.25.4)
SystemRequirements
Enhances
URL
Depends On Me
Imports Me DAPAR, Prostar
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package DAPARdata_1.24.0.tar.gz
Windows Binary
macOS 10.13 (High Sierra)
Source Repository git clone https://git.bioconductor.org/packages/DAPARdata
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/DAPARdata
Package Short Url https://bioconductor.org/packages/DAPARdata/
Package Downloads Report Download Stats

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