maSigPro

DOI: 10.18129/B9.bioc.maSigPro    

This is the development version of maSigPro; for the stable release version, see maSigPro.

Significant Gene Expression Profile Differences in Time Course Gene Expression Data

Bioconductor version: Development (3.14)

maSigPro is a regression based approach to find genes for which there are significant gene expression profile differences between experimental groups in time course microarray and RNA-Seq experiments.

Author: Ana Conesa and Maria Jose Nueda

Maintainer: Maria Jose Nueda <mj.nueda at ua.es>

Citation (from within R, enter citation("maSigPro")):

Installation

To install this package, start R (version "4.1") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("maSigPro")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("maSigPro")

 

PDF maSigPro Vignette
PDF maSigProUsersGuide.pdf
PDF   Reference Manual

Details

biocViews Differential Expression, Microarray, RNA-Seq, Software, TimeCourse
Version 1.65.0
In Bioconductor since BioC 1.7 (R-2.2) (16 years)
License GPL (>= 2)
Depends R (>= 2.3.1)
Imports Biobase, graphics, grDevices, venn, mclust, stats, MASS
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Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package maSigPro_1.65.0.tar.gz
Windows Binary maSigPro_1.65.0.zip
macOS 10.13 (High Sierra) maSigPro_1.65.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/maSigPro
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/maSigPro
Package Short Url https://bioconductor.org/packages/maSigPro/
Package Downloads Report Download Stats

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