independentFiltering {zinbwave} | R Documentation |
This function uses the DESeq2
independent filtering method
to increase detection power in high throughput gene expression
studies.
independentFiltering(object, filter, objectType = c("edgeR", "limma"))
object |
Either a |
filter |
The characteristic to use for filtering, usually a measure of normalized mean expression for the features. |
objectType |
Either |
Koen Van den Berge
Michael I Love, Wolfgang Huber, and Simon Anders. Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2. Genome Biology, 15(12):550, dec 2014.