controlStripPlot {minfi} | R Documentation |
Strip plots are produced for each control probe type specified.
controlStripPlot(rgSet, controls = c("BISULFITE CONVERSION I", "BISULFITE CONVERSION II"), sampNames = NULL, xlim = c(5, 17))
rgSet |
An |
controls |
A vector of control probe types to plot. |
sampNames |
Sample names to be used for labels. |
xlim |
x-axis limits. |
This function produces the control probe signal plot component of the QC report.
No return value. Plots are produced as a side-effect.
Martin Aryee aryee@jhu.edu.
qcReport
, mdsPlot
, densityPlot
, densityBeanPlot
if (require(minfiData)) { names <- pData(RGsetEx)$Sample_Name controlStripPlot(RGsetEx, controls=c("BISULFITE CONVERSION I"), sampNames=names) }