boxplot,MethyLumiM-method {lumi} | R Documentation |
Creating a hdr.boxplot
of the M-value in a MethyLumiM object
## S4 method for signature 'MethyLumiM' boxplot(x, main, logMode = TRUE, ...)
x |
a |
main |
title of the boxplot |
logMode |
only works when the dataType of x is "Intensity" |
... |
optional arguments to |
Because the density plot of M-values usually includes two modes, using the traditional boxplot cannot accurately represent the distribution of the data. Here we use violin plot to show the density of M-values by samples
MethyLumiM-class
, panel.violin
and boxplot,ExpressionSet-method
## load example data data(example.lumiMethy) boxplot(example.lumiMethy)