estimateIntensity {lumi} | R Documentation |
Estimate intensity of Illumina methylation data, which is the sum of Illumina methylated and unmethylated probe intensities
estimateIntensity(methyLumiM, returnType=c("ExpressionSet", "matrix"))
methyLumiM |
MethyLumiM-class object or eSet-class object, which include methylated and unmethylated probe intensities |
returnType |
determine whether return an ExpressionSet or matrix object |
The Intensity basically is the sum of Illumina methylated and unmethylated probe intensities.
An ExpressionSet or matrix object of methylation Intensity-value
Pan DU
See Also as estimateBeta
and estimateM
data(example.lumiMethy) methyLumiIntensity = estimateIntensity(example.lumiMethy) boxplot(methyLumiIntensity)