ibhForMultipleGeneLists {ibh} | R Documentation |
This function calculated interactios based homogeneity for multiple gene lists according to the interaction list
ibhForMultipleGeneLists(interactionList, listofGeneList)
interactionList |
List containing the interactions. For each gene/protein, the is an entry in the list with "name" containing name of the gen/protein and "interactors" containing the list of genes/proteins interacting with it. |
listofGeneList |
List of list of genes/proteins for which interaction based homogeneity is evaluated. |
A vector of floats representing interaction based homogeneity for each list
Kircicegi Korkmaz
require(simpIntLists) data(ArabidopsisBioGRIDInteractionEntrezId) listofGeneList <- list(list(839226,817241, 824340, 832179, 818561, 831145, 838782, 826404), list( 832018, 839226, 839226, 838824)); ibhForMultipleGeneLists( ArabidopsisBioGRIDInteractionEntrezId, listofGeneList)