genomicFrequencies {chromstaR} | R Documentation |
Get the genomewide frequency of each combinatorial state.
genomicFrequencies(multi.hmm, combinations = NULL, per.mark = FALSE)
multi.hmm |
A |
combinations |
A vector with combinations for which the frequency will be calculated. If |
per.mark |
Set to |
A table with frequencies of each combinatorial state.
Aaron Taudt
## Get an example multiHMM file <- system.file("data","multivariate_mode-combinatorial_condition-SHR.RData", package="chromstaR") model <- get(load(file)) genomicFrequencies(model)