plot.DNAcopy {cghMCR} | R Documentation |
This function takes a DNAcopy object generated by
running getSegments
and then plots the original data
along with the segments identified.
## S3 method for class 'DNAcopy' plot(x, ..., save = FALSE, layout)
x |
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... |
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save |
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layout |
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This function only works with the DNAcopy returned by
getSegments
. It will work with the DNAcopy returned by
segment of the DNAcopy package when the a column containing the probe
ids is added as the first column of the "data" element of the object.
This function returns invisible() or the name of the plot depending on whether save is set to FALSE of TRUE.
The function is a contribution of The Center for Applied Cancer Science of Dana-Farber Cancer Institute
Jianhua Zhang
The DNAcopy package
if(interactive()){ require("cghMCR") data("segData") plot(segData) }