myCounts {TarSeqQC} | R Documentation |
The pileup matrix obtained using pileupCounts. It is built on the non-real dataset containing amplicon sequencing results to test the TarSeqQC package.
A data.frame object
genomic positions of the explored features.
chromosomes of the explored features.
reference nucleotide corresponding to the genomic position.
number of nucleotide read.
Amount of read nucleotides matching the reference nucleotide.
Amount of read deletions.
feature location.
Total read counts
Gabriela A. Merino gmerino@bdmg.com.ar, Cristobal Fresno cfresno@bdmg.com.ar, Yanina Murua ymurua@leloir.org.ar, Andrea S. Llera allera@leloir.org.ar and Elmer A. Fernandez efernandez@bdmg.com.ar
Other TargetExperiment: TargetExperiment-class
,
TargetExperiment
,
ampliPanel2
, ampliPanel
,
initialize