renameColumns {TPP2D} | R Documentation |
Rename columns of imported data frame
renameColumns(dataLong, idVar, geneNameVar)
dataLong |
long format data frame of imported dataset |
idVar |
character string indicating which data column provides the unique identifiers for each protein. |
geneNameVar |
character string of the column name that describes the gene name of a given protein in the raw data files |
data frame containing imported data with renamed columns
data("config_tab") data("raw_dat_list") dataList <- import2dMain(configTable = config_tab, data = raw_dat_list, idVar = "protein_id", fcStr = "rel_fc_", addCol = "gene_name", naStrs = NA, intensityStr = "signal_sum_", nonZeroCols = "qusm", qualColName = "qupm") configLong <- configWide2Long(configWide = config_tab) annoDat <- annotateDataList(dataList = dataList, geneNameVar = "gene_name", configLong = configLong, intensityStr = "signal_sum_", fcStr = "rel_fc_") renameColumns(annoDat, idVar = "protein_id", geneNameVar = "gene_name")