jaccard_findIT_TTpair {FindIT2} | R Documentation |
jaccard_findIT_TTpair
jaccard_findIT_TTpair(input_genes, TF_target_database, input_TF_id)
input_genes |
a character vector which represent gene set which you want to find influential TF for (same as your find_IT_TTpair parameter) |
TF_target_database |
TF_target pair data |
input_TF_id |
TF_id which you want to calculate jaccard index for |
jaccard similarity matrix
data("TF_target_database") data("test_geneSet") result_findIT_TTPair <- findIT_TTPair( input_genes = test_geneSet, TF_target_database = TF_target_database ) jaccard_findIT_TTpair( input_genes = test_geneSet, TF_target_database = TF_target_database, input_TF_id = result_findIT_TTPair$TF_id[1:3] )