plot.aneuHMM {AneuFinder} | R Documentation |
Plotting function for aneuHMM
objects
Description
Make different types of plots for aneuHMM
objects.
Usage
## S3 method for class 'aneuHMM'
plot(x, type = "profile", ...)
Arguments
x |
An aneuHMM object.
|
type |
Type of the plot, one of c('profile', 'histogram', 'karyogram') . You can also specify the type with an integer number.
karyogram A karyogram-like chromosome overview with CNV-state.
histogram A histogram of binned read counts with fitted mixture distribution.
karyogram An profile with read counts and CNV-state.
|
... |
Additional arguments for the different plot types.
|
Value
A ggplot
object.
[Package
AneuFinder version 1.22.0
Index]