meshr

DOI: 10.18129/B9.bioc.meshr    

Tools for conducting enrichment analysis of MeSH

Bioconductor version: Release (3.13)

A set of annotation maps describing the entire MeSH assembled using data from MeSH.

Author: Koki Tsuyuzaki, Itoshi Nikaido, Gota Morota

Maintainer: Koki Tsuyuzaki <k.t.the-answer at hotmail.co.jp>

Citation (from within R, enter citation("meshr")):

Installation

To install this package, start R (version "4.1") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("meshr")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("meshr")

 

PDF R Script MeSH.db
PDF   Reference Manual
Text   NEWS

Details

biocViews Annotation, AnnotationData, Bioinformatics, FunctionalAnnotation, MeSHDb, MultipleComparisons, Software, Statistics
Version 1.28.0
In Bioconductor since BioC 2.14 (R-3.1) (7.5 years)
License Artistic-2.0
Depends R (>= 3.0.1)
Imports methods, stats, utils, fdrtool, MeSH.db, MeSH.AOR.db, MeSH.PCR.db, MeSHDbi, MeSH.Hsa.eg.db, MeSH.Aca.eg.db, MeSH.Bsu.168.eg.db, MeSH.Syn.eg.db, cummeRbund, org.Hs.eg.db, Category, S4Vectors, BiocGenerics, RSQLite
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me scTensor
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package meshr_1.28.0.tar.gz
Windows Binary meshr_1.28.0.zip
macOS 10.13 (High Sierra) meshr_1.28.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/meshr
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/meshr
Package Short Url https://bioconductor.org/packages/meshr/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: