EXP_to_CellDataSet {uSORT} | R Documentation |
A function for constructing a Monocle's CellDataSet object from an expression matrix
EXP_to_CellDataSet(log2_exp = NULL, expression_data_raw = NULL, lod = 1)
log2_exp |
An log2 transformed expresssion matrix containing n-rows of cells and m-cols of genes. |
expression_data_raw |
A data frame containing raw expression values, with rownames of cells and colnames of genes. |
lod |
A value of limit of detection in the unit of TPM/CPM/RPKM. |
A CellDataSet object.