Terms {transcriptogramer} | R Documentation |
Gets the content of the Terms slot of an object of class Transcriptogram.
Terms(object) ## S4 method for signature 'Transcriptogram' Terms(object)
object |
An object of class Transcriptogram. |
This method returns the content of the Terms slot of an object of class Transcriptogram.
Diego Morais
differentiallyExpressed, transcriptogramPreprocess, GSE9988, GPL570, Hs900, HsBPTerms, association, transcriptogramStep1, transcriptogramStep2, clusterEnrichment
transcriptogram <- transcriptogramPreprocess(association, Hs900, 50) ## Not run: transcriptogram <- transcriptogramStep1(transcriptogram, GSE9988, GPL570) transcriptogram <- transcriptogramStep2(transcriptogram) levels <- c(rep(FALSE, 3), rep(TRUE, 3)) transcriptogram <- differentiallyExpressed(transcriptogram, levels, 0.01) transcriptogram <- clusterEnrichment(transcriptogram, species = "Homo sapiens", pValue = 0.005) Terms(transcriptogram) ## End(Not run)