calIndex {scRepertoire} | R Documentation |
Calculate cluster level indices
Startrac.calIndex(object, cores, n.perm, normEntropy) ## S4 method for signature 'Startrac' calIndex(object, cores = NULL, n.perm = NULL, normEntropy = FALSE)
object |
A Startrac object |
cores |
number of core to be used. Passed to doParallel registerDoParallel. default: NULL. |
n.perm |
integer number of permutation will be performed. If NULL, no permutation. (default: NULL) |
normEntropy |
logical; whether normalize migration and transition index. default: FALSE. |
an object of class Startrac