correctedIntensities {savR} | R Documentation |
Returns a data frame of corrected intensity data.
correctedIntensities(project) ## S4 method for signature 'savProject' correctedIntensities(project)
project |
SAV project |
lane
:Lane number
tile
:Tile ID
cycle
:Cycle number
avg_intensity
:Average intensity
avg_cor_[ACGT]
:Average corrected intensity of channel A, C, G, or T
avg_cor_called_[ACGT]
:Average corrected intensity for called clusters in channel A, C, G, or T
num_{none|[ACGT]}
:Number of called bases for no-call, A, C, G, or T
sig_noise
:Signal to noise ratio
sorted data.frame of CI data.
example(savR) colnames(correctedIntensities(fc))