dominant {microbiome}R Documentation

Dominant taxa

Description

Returns the dominant taxonomic group for each sample.

Usage

dominant(x, level = NULL)

Arguments

x

A phyloseq-class object

level

Optional. Taxonomic level.

Value

A vector of dominance indices

Author(s)

Leo Lahti microbiome-admin@googlegroups.com

Examples

data(dietswap)
# vector
d <- dominant(dietswap)

[Package microbiome version 1.14.0 Index]