getInv-methods {inveRsion} | R Documentation |
Each row of the matrix represents a trial segment of fixed window size, for which the inversion model has been fit. It lists the left and right brake-points and output of the fitting: Log-likelihood ratio, probability of inversion, entropy, BIC (Bayes Information Criterion) and number of haplotypes.
getInv(object, thBic, rnd, Like)
object |
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thBic |
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rnd |
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Like |
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Matrix with output of scanInv
. Each row corresponds to a trail segments with given brake points and significance measures for the inversion model.
matrix
.
signature(object = "scan")
returns matrix with output of inversion model for each trial segment
data(scanRes) a<-getInv(scanRes,thBic=2500) a