pathways {graphite}R Documentation

Retrieve a list of pathways.

Description

Retrieve a list of pathways from a database for a given species.

graphite currently supports the following databases:

Call the pathwayDatabase function for more details.

Usage

  pathways(species, database)

Arguments

species

one of the supported species

database

the name of the pathway database

Value

A PathwayList object.

See Also

PathwayList, pathwayDatabases

Examples

  pathways("hsapiens", "reactome")

[Package graphite version 1.38.0 Index]