getVR {genotypeeval} | R Documentation |
getVr is a Getter. Returns vr slot.
getVR(x)
x |
VCFData object |
VRanges
vcffn <- system.file("ext-data", "chr22.GRCh38.vcf.gz", package="genotypeeval") mydir <- paste(dirname(vcffn), "/", sep="") myfile <-basename(vcffn) svp <- ScanVcfParam(which=GRanges("22", IRanges(0,1e5)), geno="GT") vcf <- ReadVCFData(mydir, myfile, "GRCh38") getVR(vcf)