easyRNASeq AnnotParam accessors {easyRNASeq}R Documentation

Accessors for AnnotParam class

Description

These functions and generics define 'accessors' (to get and set values) for AnnotParam objects within the easyRNASeq package. Implemented are:

Usage

datasource(object)
## S4 method for signature 'AnnotParam'
type(x)

Arguments

object

An object derived from class AnnotParam.

x

An object derived from class AnnotParam.

Value

The value of the corresponding slot.

Author(s)

Nicolas Delhomme

See Also

The AnnotParam class. The type and organism generics are imported from the BSgenome and Biostrings package, respectively.

Examples

# fetch the example data
Dm.annot <- fetchData("Dmel-mRNA-exon-r5.52.gff3.gz")

annot <- AnnotParam(datasource=Dm.annot)
# get the datasource Parameter
datasource(annot)


[Package easyRNASeq version 2.28.0 Index]