loadAllData {deepSNV} | R Documentation |
This function uses the parallel package and the bam2R interface to load all nucleotide counts from a list of bam files and a set of regions into a large array.
loadAllData(files, regions, ..., mc.cores = 1)
files |
A character vector with the paths to all bam files |
regions |
Either a GRanges or data.frame with the coordinates of interest |
... |
Arguments passed to bam2R |
mc.cores |
Number of cores used for loading, default = 1 |
counts
Experimental code, subject to changes
mg14