classify_indels {YAPSA} | R Documentation |
INDEL function V1 - not compartible with AlexandrovSignatures
classify_indels( in_df, in_ALT.field = "ALT", in_REF.field = "REF", in_breaks = c(-Inf, -10, -3, 0, 2, 9, Inf), in_labels = c("del3", "del2", "del1", "in1", "in2", "in3") )
in_df |
Input data frame containing the variances in a vcf-like format |
in_ALT.field |
Column number for alternitve field |
in_REF.field |
Coloumn number for reference field |
in_breaks |
Handed over to function cut |
in_labels |
Handed over to function cut |
classVector, a factor vector of indel sizes
NULL