sampleAnnotation.txt {SeqSQC} | R Documentation |
This sample annotation file is a required input from the user when
using SeqSQC. It includes the sample info with sample name stored
in the column of sample
, the population info stored in the
column of population
, and the gender info stored in the
column of gender
. The population
column must be a in
the format of "AFR/EUR/ASN/EAS/SAS". The gender
column must
be in the format of "female/male". This file is meant to be used
together with the example_sub.vcf
as a runnable example in
the function of LoadVfile
and sampleQC
in the
vignette.
Qian Liu qliu7@buffalo.edu