installTCGA {RTCGA} | R Documentation |
Function installs data packages from https://github.com/RTCGA/. Packages are listed datasetsTCGA.
installTCGA(packages = c("RTCGA.clinical", "RTCGA.mutations", "RTCGA.rnaseq", "RTCGA.RPPA", "RTCGA.mRNA", "RTCGA.CNV", "RTCGA.miRNASeq", "RTCGA.PANCAN12", "RTCGA.methylation"), build_vignettes = TRUE, ...)
packages |
A character specifing the names of the data packages to be installed. By default installs all packages. |
build_vignettes |
Should vignettes be build. |
... |
Further arguments passed to install_github. |
If you have any problems, issues or think that something is missing or is not clear please post an issue on https://github.com/RTCGA/RTCGA/issues.
Marcin Kosinski, m.p.kosinski@gmail.com
RTCGA website http://rtcga.github.io/RTCGA.
Other RTCGA: RTCGA-package
,
boxplotTCGA
, checkTCGA
,
convertTCGA
, datasetsTCGA
,
downloadTCGA
,
expressionsTCGA
, heatmapTCGA
,
infoTCGA
, kmTCGA
,
mutationsTCGA
, pcaTCGA
,
readTCGA
, survivalTCGA
,
theme_RTCGA
## Not run: installTCGA() installTCGA('RTCGA.clinical') ## End(Not run)