makeExonRanks {ORFik} | R Documentation |
There are two ways to make vector of exon ranking: 1. Iterate per exon in ORF, byTranscript = FALSE 2. Iterate per ORF in transcript, byTranscript = TRUE.
makeExonRanks(grl, byTranscript = FALSE)
grl |
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byTranscript |
logical (default: FALSE), groups orfs by transcript name or ORF name, if ORfs are by transcript, check duplicates. |
Either by transcript or by original groupings. Must be ordered, so that same transcripts are ordered together.
an integer vector of indices for exon ranks