InterMineR-methods {InterMineR} | R Documentation |
InterMineR-class
objects.
InterMineR constitutes a class used to store the information which are required for performing a query for biological data in an InterMine instance. The methods for accessing the slots of an InterMineR-class object are presented here.
Class-specific methods:
getName(InterMineR-class)
:Access the name slot of InterMineR-class
object.
getDescription(InterMineR-class)
:Access the description slot of InterMineR-class
object.
getSelect(InterMineR-class)
:Access the select slot of InterMineR-class
object.
getOrderBy(InterMineR-class)
:Access the orderBy slot of InterMineR-class
object.
getWhere(InterMineR-class)
:Access the where slot of InterMineR-class
object.
InterMine Team
setConstraints
, setQuery
, InterMineR-class
# get mine instance im.fly = initInterMine(listMines()["FlyMine"]) # get GO_Gene template query qGO_Gene = getTemplateQuery(im.fly, "GO_Gene") # create 'InterMineR' object go.query = setQuery( inheritQuery = qGO_Gene ) class(go.query) # access name: getName(go.query) # access description: getDescription(go.query) # access select: getSelect(go.query) # access orderBy: getOrderBy(go.query) # access where: getWhere(go.query)