pmPlotSignature {HiLDA}R Documentation

Plot mutation signatures from pmsignature output

Description

Plot mutation signatures from pmsignature output

Usage

pmPlotSignature(inputParam, sigOrder = NULL, colorList = NULL, ...)

Arguments

inputParam

a estimatedParameters S4 class output by the pmsignature.

sigOrder

the order of signatures if needed (default: NULL).

colorList

a list of color to highlight the signatures (default: NULL).

...

additional arguments passed on to visPMS.

Value

a plot object containing all mutational signatures

Examples


load(system.file("extdata/sample.rdata", package="HiLDA"))
Param <- pmgetSignature(G, K = 3)
pmPlotSignature(Param)


[Package HiLDA version 1.6.0 Index]