GetMatAdj {DAPAR} | R Documentation |
MSnSet
Returns the contains of the slot processing of an object of
class MSnSet
GetMatAdj(obj)
obj |
An object (peptides) of class |
The slot processing of obj@processingData
Samuel Wieczorek
utils::data(Exp1_R25_pept, package='DAPARdata') Xshared <- BuildAdjacencyMatrix(Exp1_R25_pept[1:1000], "Protein_group_IDs", FALSE) Xunique <- BuildAdjacencyMatrix(Exp1_R25_pept[1:1000], "Protein_group_IDs", TRUE) ll.X <- list(matWithSharedPeptides = Xshared, matWithUniquePeptides = Xunique) Exp1_R25_pept <- SetMatAdj(Exp1_R25_pept, ll.X) ll.X <- GetMatAdj(Exp1_R25_pept)