plotLLSurface {BioNet} | R Documentation |
The function plots the log likelihood surface for all a and lambda parameter of the beta-uniform mixture model.
plotLLSurface(x, opt=NULL, main="Log-Likelihood Surface", color.palette = heat.colors, nlevels = 32)
x |
Numeric vector of p-values. |
opt |
List of optimal parameters for a and lambda from the beta-uniform mixture model. |
main |
The overall title of the plot. |
color.palette |
Color scheme of the image plot. |
nlevels |
Number of color levels. |
Marcus Dittrich
library(DLBCL) data(dataLym) pvals <- dataLym$t.pval names(pvals) <- dataLym$label mle <- fitBumModel(pvals, plot=FALSE) plotLLSurface(x=pvals, opt=mle)