ppiData

DOI: 10.18129/B9.bioc.ppiData    

This package is for version 3.12 of Bioconductor; for the stable, up-to-date release version, see ppiData.

A package that contains the bait to prey directed graphs for protein-protein interactions.

Bioconductor version: 3.12

This package contains the directed graphs for protein interaction data as derived from Y2H and APMS as well as the code used to obtain the y2h data from IntAct Repository.

Author: Tony Chiang

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("ppiData")):

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ppiData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ppiData")

 

PDF R Script Using the package ppiStats
PDF   Reference Manual

Details

biocViews ExperimentData
Version 0.28.0
License Artistic-2.0
Depends graph
Imports AnnotationDbi
LinkingTo
Suggests org.Sc.sgd.db, ppiStats
SystemRequirements
Enhances
URL
Depends On Me PCpheno, ppiStats
Imports Me
Suggests Me ScISI
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package ppiData_0.28.0.tar.gz
Windows Binary
macOS 10.13 (High Sierra)
Source Repository git clone https://git.bioconductor.org/packages/ppiData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/ppiData
Package Short Url https://bioconductor.org/packages/ppiData/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: