SpidermiR ---------------------------------------------------------------- FIRST VERSION - FEATURES * SpidermiRquery_species Searching by species. * SpidermiRquery_networks_type Searching by network categories. * SpidermiRquery_spec_networks Searching by species, and network categories. * SpidermiRquery_disease Searching by miRNA-disease. * SpidermiRdownload_net Downloading network data. * SpidermiRdownload_pharmacomir Download both miRNA target and the gene-drug interaction from PharmacomiR database. * SpidermiRdownload_miRNAvalidate Download miRNA validated database * SpidermiRprepare_NET Prepare matrix of gene network with Ensembl Gene ID, and gene symbols. * SpidermiRanalyze_mirna_network Integration of microRNA-target interactions. * SpidermiRanalyze_mirna_gene_complnet Integration of microRNA-target complete interactions. * SpidermiRanalyze_mirna_extra_cir Integration of Extracellular/Circulating miRNA. * SpidermiRanalyze_direct_net Searching by biomarkers of interest with direct interaction. * SpidermiRanalyze_direct_subnetwork Network composed by only the nodes in biomarkers of interest. * SpidermiRanalyze_subnetwork_neigh Network composed by the nodes in biomarker of interest and all the edges among this brunch of nodes. * SpidermiRanalyze_degree_centrality Ranking degree centrality genes. * SpidermiRanalyze_Community_detection Find community detection. * SpidermiRanalyze_Community_detection_net Find the network of community detection. * SpidermiRanalyze_Community_detection_bi Community detection from biomarkers of interest. * SpidermiRanalyze_mirnanet_pharm Integration of pharmacomiR in the network. * SpidermiRvisualize_mirnanet Visualize Integration of direct gene network and direct-miRNA information. * SpidermiRvisualize_BI Visualize the network from a set of biomarkers of interest. * SpidermiRvisualize_plot_target Visualize the plot with miRNAs and the number of their targets in the network.